PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027165926.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 300aa    MW: 33998.1 Da    PI: 6.6846
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027165926.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM68.71.6e-2141501128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy....kvePwdLpk..............kvkaeekewyfFskrdkkya.tgkrknr 76 
                     lp G+rF Ptdeel+++yLk+kv++++l+ +++  e diy    ++ Pw L                kv  ++k +y F+k  +  + ++k+k+r
  XP_027165926.1   4 LPFGVRFCPTDEELITHYLKNKVTEQPLPSDKFTIERDIYgeneTATPWILFGedapwqtpvvdafgKVFVHQKVLYVFTKLLNVGKsSDKNKKR 98 
                     689************************9998876677877322235799995246788888888777555588899***9987776515778888 PP

             NAM  77 atksgyWkatgkdkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++  g W++    ++++++   + +l+g k+t+++ +   ++ +  +W+mhey+l
  XP_027165926.1  99 IAGCGNWHNNSAPEPIMKNwgwGYQLIGNKRTFTYRS---KEETVGHWTMHEYEL 150
                     999***************99999999********974...444568*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MDNLPFGVRF CPTDEELITH YLKNKVTEQP LPSDKFTIER DIYGENETAT PWILFGEDAP  60
WQTPVVDAFG KVFVHQKVLY VFTKLLNVGK SSDKNKKRIA GCGNWHNNSA PEPIMKNWGW  120
GYQLIGNKRT FTYRSKEETV GHWTMHEYEL AGASLQGINL ENNYVLCKIK RDDSKSSKGG  180
RLLSWKNSRF AMVQFNEDDE VIVEPVMGNS VPKATLGKRK SVSGEGKQPE ETENFRRGYI  240
QYRGDGIESS GLKLVQEESS TSVNNYSNPF DLKNVKQVNS NGDSSSTMDD LFQFQPGNLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.26e-13NAC family protein