PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027165520.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family Trihelix
Protein Properties Length: 891aa    MW: 98761.2 Da    PI: 8.864
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027165520.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix69.28.2e-22805885186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W+ +e+++Li++r e+++r++  k +++lWee+s+++ ++g++rsp qCk+ w +l ++y++ k+ +k+r     +++pyfd+++
  XP_027165520.1 805 KWKPEEIKKLIRMRGELHNRFQVVKGRMALWEEISSNLLSGGISRSPGQCKSLWASLVQKYEESKTDSKSR-----EKWPYFDDMN 885
                     7********************************************************************96.....78******97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 891 aa     Download sequence    
MAAISFSAVS LYPYAHKGSL FLAANPNPSR QCISCCGPSH STSTIGSRGG SREPRKRSRG  60
RAEGPRKSME DSVQRKMEQF YEGSDGPPLR VLPIGGLGEI GMNCMLVGNF DRYILIDAGV  120
MFPGYDELGV QKIIPDTTFI KKWSHKIEAV VITHGHEDHI GNSCFGCTHA YICIFLYNGV  180
AFPVFVQLIK KRLKEFGIFI PSRLKIFKTK MRFVAGPFEV EPIRVTHSIP DCCGLVLRCA  240
DGTILHTGDW KIDETPLDGK VFDRGALEEL SKEGVTLMMS DSTNVLSPGR TLSETVVADA  300
LLRRISAAKG RVITTQFASN IHRLGSVKAA ADLTGRKLVF VGMALRTYLD AAWKDGKAPI  360
DPSTLVKVED IDSYSPKDLL IVTTGSQAEP RAALNLASYG SSHSLKLTQE DLILYSAKVI  420
PGNETRVMKM LNRISEIGSA IVMGKNEYLH SSGHAHREEL DEVLKIVKPQ HFLPIHGELL  480
FLKEHELLGK STGIRHTVVI KNGEMLGVSH LRNRRVLSNG FTSLGKENLQ LMYSDGDKAF  540
GTSTELCIDE RLRIASDGII VISMEILRPQ ASNSLTEKTL KGKIKITTRC LWLDKGKLLD  600
ALHKAAHAAL SSCPVNSPLV HMERTVSEVL RKVVRKYSSK RPEVIAIALE NPAGVLADDI  660
NGKLSERSRV GLGISTLRKA VDGHQRKRRP NGAQEVDDSD SHAHLRSIMQ QDLEDNEMDF  720
DKLLSKDEAN SVSTSSEAFS SNGAESDNFW KSFVQIPTNN VLEEGNTSLQ LQKEHYENSE  780
IDSGELDSGL PKSELKSSKS VKPNKWKPEE IKKLIRMRGE LHNRFQVVKG RMALWEEISS  840
NLLSGGISRS PGQCKSLWAS LVQKYEESKT DSKSREKWPY FDDMNTIFVR H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63420.10.0Trihelix family protein