PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027165068.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 317aa    MW: 35058.2 Da    PI: 8.6399
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027165068.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.4e-20159209255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp   + k  r++lg+f+ta eAaka+++a+ +l+g
  XP_027165068.1 159 HYRGVRQRP-WGKFAAEIRDP---NrKGSRVWLGTFDTAVEAAKAYDKAAFRLRG 209
                     8********.**********9...6566*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MASQTQITET SALELIKQHL LDDFAFMENY CVSDDRLSQF SHLSTSQSNN SSDSDTSSFA  60
TSNASFSFAT SSSSSSINYM ELETKPNVAL TTPNHPRQTA TSFSERKPVL NIAIPPPVKK  120
LLDFNKMNTS NTTTTTYEQP KAKAVEQKKV QEGSAEKKHY RGVRQRPWGK FAAEIRDPNR  180
KGSRVWLGTF DTAVEAAKAY DKAAFRLRGS KAILNFPHEV GNNTLPESEL ATTSGRKRAR  240
EPDVVSEDIV KKEVKREEVS PASVRKGEER GLPTDPLTPS SWTAVWDCGD VKGIFEIPPL  300
SPLSPHPSLG YSQLMVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.15e-37ERF family protein