PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027164912.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 133aa MW: 14485.9 Da PI: 6.2694 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.5 | 1.9e-19 | 17 | 69 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++y+GVr ++ +g+++AeIrd + +r++lg+f ta eAaka+++a+ +++g+ XP_027164912.1 17 PKYRGVRKRP-WGKYAAEIRDSANH--GARVWLGTFNTAVEAAKAYDRAAYAMRGH 69 79********.**********5333..3**************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 133 aa Download sequence |
MEGPGDRGRA RDEGGEPKYR GVRKRPWGKY AAEIRDSANH GARVWLGTFN TAVEAAKAYD 60 RAAYAMRGHL AILNFPEDYN LPSSSSHFAS ASSSSTAAST SSSAREGVIE IPYYDDKLLE 120 ELLGAEEKSG RQD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G23220.1 | 4e-25 | ERF family protein |