PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027164795.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 337aa MW: 37169.5 Da PI: 4.9306 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56 | 9.7e-18 | 50 | 98 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + GVr+++ +gr++AeIrdp++ + r++lg+f+ta+eAa a+++a+++++g XP_027164795.1 50 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 98 56******.**********965...5************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 337 aa Download sequence |
MSTSKTPEKP FNLYEPILTQ TGFTLLQRNT SVSQPSEKRG RRKQAEPGRF LGVRRRPWGR 60 YAAEIRDPTT KERHWLGTFD TAQEAALAYD RAALSMKGTQ ARTNFVYSDN TNFHSLISPF 120 DLQSILPPSH SLTKNQNKQH DATKHPSSSS QAREHPISSD NDACSQSSYG SSPSENFFFS 180 SGSETNSGYL DCIVPDNCLK PPSHHKEYSN NSNADQTSVD QSNYSNLRVL ENQSHSDADV 240 TNVLPVDSTN PGNFSCYEGL NFGFLENEQS WEMNSCELSA VINNPLMGET GCMEGYDPTV 300 DNTSLESMAA ATSSAGFSSV FPPFAFGDVV DSGYPLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18560.1 | 8e-65 | ERF family protein |