PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027164636.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 258aa    MW: 28718.2 Da    PI: 8.1509
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027164636.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.55.2e-2173122255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdp     +  r++lg+f taeeAa+a+++a+k+++g
  XP_027164636.1  73 KYRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTFNTAEEAARAYDKAAKRIRG 122
                     8********.**********94....35************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MCGGAIISGG SPINPGRKLT PKELWAEFDT ISPFWGFDPS GQAADTKATD KNKHPKKGNQ  60
KSEKISQKPR KNKYRGIRQR PWGKWAAEIR DPQKGVRVWL GTFNTAEEAA RAYDKAAKRI  120
RGDKAKLNFV ADDQPPPTTP SQPTPPRQPL AKRRCVTPEP PPAYYPQPDQ EILESIGPTP  180
PVVDPGFQPQ PYYPSQVTDQ DYQYGDQFSS LESFLGLEPE TTTTATSQFG GITESDQVDL  240
WMMDDLVATA QQPNNLLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.12e-46ERF family protein