PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027164635.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 260aa    MW: 28846.3 Da    PI: 8.1509
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027164635.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.55.3e-2175124255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdp     +  r++lg+f taeeAa+a+++a+k+++g
  XP_027164635.1  75 KYRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTFNTAEEAARAYDKAAKRIRG 124
                     8********.**********94....35************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MCGGAIISGG SPINPGRKLT PKELWAEFDT ISPFWGFDPS GQAADTKATD KNKHPKKGAG  60
NQKSEKISQK PRKNKYRGIR QRPWGKWAAE IRDPQKGVRV WLGTFNTAEE AARAYDKAAK  120
RIRGDKAKLN FVADDQPPPT TPSQPTPPRQ PLAKRRCVTP EPPPAYYPQP DQEILESIGP  180
TPPVVDPGFQ PQPYYPSQVT DQDYQYGDQF SSLESFLGLE PETTTTATSQ FGGITESDQV  240
DLWMMDDLVA TAQQPNNLLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.12e-44ERF family protein