PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027164350.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 343aa    MW: 38400.5 Da    PI: 10.0009
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027164350.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.61.9e-31277334359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ e+p+++++tYegeHnh+
  XP_027164350.1 277 DEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYEGEHNHP 334
                     9************************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MEEVEEANKA AIESCYRVLS LISQPQDQKQ YRNLAVETGE AVCKFKKVVS LLNSTLGHAR  60
VRKVKKIQTP FPPSILLENS ICRTDDQPKA LQLLRINSLD NPVQDSGSNV KSSLTLGNPS  120
LEFISHGKNT LQLAQQTPPP NYHFLQQQQQ RYQLQQQQLK QQADMMYRRS NSGISLNFDS  180
STCTPTMSSA RSFISSLSID GSVANLDGNA FHLIGASRSA DQSTYQHKRR CSGRGEDGSV  240
KCGSSGRCHC SKKRKHRVKR SIKVPAISNK LADIPPDEYS WRKYGQKPIK GSPHPRGYYK  300
CSSMRGCPAR KHVERCLEEP SMLIVTYEGE HNHPRLPSQS ANT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-117WRKY family protein