PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027163441.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 25575.7 Da PI: 5.0043 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.4 | 3.7e-18 | 65 | 115 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+G+r++ +g+Wv+e+r+p +k+ r++lg+f tae+Aa+a++ a+ +l+g XP_027163441.1 65 PVYRGIRRRN-SGKWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAAIALRG 115 68*****888.8******9998...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MNHFSICYSD PIPNPSSPDF PDSSSTSDNV VNACKANYSD EEVLLASNNP KKRAGRKKFR 60 ETRHPVYRGI RRRNSGKWVC EVREPNKKSR IWLGTFPTAE MAARAHDVAA IALRGRSACL 120 NFADSAWRLP VPESPEPKHI QKAAAEAAEA FRPSESCDGV SSVAFGDDAN KEECGSVAFP 180 ENVFFMDEDA VFGMPGLIAN MAEGLMLPPP QCGVGDDLEL EANADMFLWS YSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25490.1 | 5e-76 | ERF family protein |