PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027163338.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 289aa MW: 31489.1 Da PI: 9.7125

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027163338.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.2	2e-39	39	99	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 k++al+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+s+ XP_027163338.1 39 KDQALNCPRCHSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNKRST 99 7899******************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MDTTNQWTQE IGGLKSMGEI ASSPCSRPVV QERKVRPQKD QALNCPRCHS TNTKFCYYNN 60 YSLTQPRYFC KTCRRYWTEG GTLRNVPVGG GSRKNKRSTT TNTSSHKHPD LNPPTITHFA 120 SQNPKIHPQG QDLNLGFPAS QDYHGHASKI FELPKVDVSG CNQLKSSSSA SSAPFAALEF 180 LRTGIVSRGM NSFITSTIPA VDLNALYNAQ GFQFQDLKPA AGVSFSVDHH GLGNRFVNAP 240 SGIQENGGRL MFPFGAVKQG TSTSAVDQNK GQSDSSGYWN GMLGGGSWM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61850.4	5e-61	Dof family protein