PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027162703.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

C2H2

Protein Properties

Length: 369aa MW: 42422.3 Da PI: 6.7059

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027162703.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.0005	78	100	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H XP_027162703.1 78 CSyeGCGKTFIDAGALRKHSHIH 100 77779**************7766 PP
2	zf-C2H2	15.9	3.6e-05	105	129	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ +Cgk F ++s LkrH H XP_027162703.1 105 YVCHyeNCGKKFLDSSKLKRHFLIH 129 9********************8877 PP
3	zf-C2H2	21.7	5.3e-07	135	159	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk Fs nL++H++tH XP_027162703.1 135 FVCPheGCGKAFSLDFNLRSHMKTH 159 89**********************9 PP
4	zf-C2H2	18.6	5.2e-06	165	189	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi tH XP_027162703.1 165 HICPypDCGKRYAHEYKLKNHIATH 189 679999******************6 PP
5	zf-C2H2	13.2	0.00027	227	252	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C k + + + L+ H+r+ H XP_027162703.1 227 YACPyeGCEKAYIHEYKLNLHLRReH 252 89*********************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
METHITHNLF ERRHIIKSRA PAVKWTREWV PQDVVATGGK CLLLRWVNEA TLKAIKEKKE 60 PELPEPEPEP TTEVLFLCSY EGCGKTFIDA GALRKHSHIH GERQYVCHYE NCGKKFLDSS 120 KLKRHFLIHT GERDFVCPHE GCGKAFSLDF NLRSHMKTHS QENYHICPYP DCGKRYAHEY 180 KLKNHIATHH EKNMVETPKY ALPPEKPVKT PKSSTAAYSS ASSDRPYACP YEGCEKAYIH 240 EYKLNLHLRR EHPGHFKDET PKNAQSTAEN DMDEASDQDA YAGKRGNDKI QKQSKAKPSL 300 KLPPAKVQRK SSSNASPANA SVVKKPWPVK EEVYDEEDSE ETEEERENVG DGWRYAENED 360 DDEETEYED

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

METHITHNLF ERRHIIKSRA PAVKWTREWV PQDVVATGGK CLLLRWVNEA TLKAIKEKKE  60
PELPEPEPEP TTEVLFLCSY EGCGKTFIDA GALRKHSHIH GERQYVCHYE NCGKKFLDSS  120
KLKRHFLIHT GERDFVCPHE GCGKAFSLDF NLRSHMKTHS QENYHICPYP DCGKRYAHEY  180
KLKNHIATHH EKNMVETPKY ALPPEKPVKT PKSSTAAYSS ASSDRPYACP YEGCEKAYIH  240
EYKLNLHLRR EHPGHFKDET PKNAQSTAEN DMDEASDQDA YAGKRGNDKI QKQSKAKPSL  300
KLPPAKVQRK SSSNASPANA SVVKKPWPVK EEVYDEEDSE ETEEERENVG DGWRYAENED  360
DDEETEYED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-125	C2H2 family protein