PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027162695.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 292aa    MW: 32876.2 Da    PI: 5.302
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027162695.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY955.4e-3079136359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++++tY+ eHnh+
  XP_027162695.1  79 DSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPNMLVVTYSCEHNHP 136
                     99************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
METRFANSPL INEQEDSENS PENSGDSPRF CMLNDSKMTC TSSPKKSSRR SIQKRVVSVP  60
IKDPEGSRLK GEMGVPPFDS WAWRKYGQKP IKGSPYPRGY YRCSSSKGCP ARKQVERSRV  120
DPNMLVVTYS CEHNHPWPTP RNQNHHNQNQ NSSPSINKAT KTTSTKGEST NSANSDEEEG  180
EEEEKPAKFA SQAELNSDEK FVPLISSASD YGWFSEFEST TSCTMLESPI LTEARVTDAD  240
LAMAFTMRDD DESFFADLGE LPECSTVFHR GMMEREEERR RHGLTPWCGT TG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.12e-70WRKY family protein