PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027162668.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 292aa MW: 32876.2 Da PI: 5.302 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95 | 5.4e-30 | 79 | 136 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++++tY+ eHnh+ XP_027162668.1 79 DSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPNMLVVTYSCEHNHP 136 99************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
METRFANSPL INEQEDSENS PENSGDSPRF CMLNDSKMTC TSSPKKSSRR SIQKRVVSVP 60 IKDPEGSRLK GEMGVPPFDS WAWRKYGQKP IKGSPYPRGY YRCSSSKGCP ARKQVERSRV 120 DPNMLVVTYS CEHNHPWPTP RNQNHHNQNQ NSSPSINKAT KTTSTKGEST NSANSDEEEG 180 EEEEKPAKFA SQAELNSDEK FVPLISSASD YGWFSEFEST TSCTMLESPI LTEARVTDAD 240 LAMAFTMRDD DESFFADLGE LPECSTVFHR GMMEREEERR RHGLTPWCGT TG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29280.1 | 2e-70 | WRKY family protein |