PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027162652.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 325aa    MW: 36703.4 Da    PI: 8.2884
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027162652.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.23.4e-06164183120
                     EEETTTTEEESSHHHHHHHH CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                     ++Cp C k+F+r  nL+ H+
  XP_027162652.1 164 FSCPVCFKTFNRYNNLQMHM 183
                     89*****************9 PP

2zf-C2H215.84e-05248270123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     + C +Cgk+F  k + ++H +++
  XP_027162652.1 248 FMCRKCGKPFAVKGDWRTHEKNC 270
                     89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MAEPCYYNFF PGWCNFIPHH PHFSSSNSNA VNSISSSEIE FSLSPPSPPR KEALPLLNNL  60
SFRPDEQQDF SGYALEDDRC TSTKTESSLS GTPPLHDFVT VALNIGLPSP SSDLSSSRLP  120
SCNWDKREKE GGNVLSELPL NDKLNKGQYW IPSPSQILIG PTQFSCPVCF KTFNRYNNLQ  180
MHMWGHGSQY RKGPESLRGT QPTAMLKLPC YCCAPGCKHN IDHPRTRPLK DFRTLQTHYK  240
RKHGIKPFMC RKCGKPFAVK GDWRTHEKNC GKIWYCICGS DFKHKRSLKD HIRAFGRGHG  300
ALGIHVSEEE DDSASDIDQE RESPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.11e-113C2H2 family protein