PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027162429.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 367aa MW: 40910.5 Da PI: 5.0897 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.6 | 6.2e-29 | 133 | 193 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 +dDg++WrKYGqK++ g++fpr+YYrCt++ gC ++k+v+rs+edp v+e+tY+g+H + XP_027162429.1 133 VDDGHSWRKYGQKDILGANFPRAYYRCTHRnsrGCLATKQVQRSDEDPAVFEVTYKGRHSC 193 59***************************98899*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 367 aa Download sequence |
MEKVNPSEQK NLIIELSQGR EMANELRKQL DPVTSPETCE ALVEKIVSTY DKALAMLTWR 60 VLKEEETLPE TGRKESPLFH SPVLTTPITE GSNSSGFSKD QECNKDASKK RKTLPKWSEN 120 VRVCSASGLE GHVDDGHSWR KYGQKDILGA NFPRAYYRCT HRNSRGCLAT KQVQRSDEDP 180 AVFEVTYKGR HSCIQAANSG SAIRSDGKEM HKPKKARSLA REGGNQMGAE QTLQHLGQGL 240 KVETEVSKTK EEIFRSFSFS FKGVGSDILE SQFFSDVMKD CDMMGSNSPT FLSPTTSESN 300 YFSSSCQMDN NFGIDNILQT SESDLTDMIS TPTSVISSSP FGDHDFSIDQ VDFDTSFTLD 360 DDLAYFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.1 | 3e-45 | WRKY family protein |