PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027162429.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 367aa MW: 40910.5 Da PI: 5.0897

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027162429.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	91.6	6.2e-29	133	193	1	58
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 +dDg++WrKYGqK++ g++fpr+YYrCt++ gC ++k+v+rs+edp v+e+tY+g+H + XP_027162429.1 133 VDDGHSWRKYGQKDILGANFPRAYYRCTHRnsrGCLATKQVQRSDEDPAVFEVTYKGRHSC 193 59*************************98899***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MEKVNPSEQK NLIIELSQGR EMANELRKQL DPVTSPETCE ALVEKIVSTY DKALAMLTWR 60 VLKEEETLPE TGRKESPLFH SPVLTTPITE GSNSSGFSKD QECNKDASKK RKTLPKWSEN 120 VRVCSASGLE GHVDDGHSWR KYGQKDILGA NFPRAYYRCT HRNSRGCLAT KQVQRSDEDP 180 AVFEVTYKGR HSCIQAANSG SAIRSDGKEM HKPKKARSLA REGGNQMGAE QTLQHLGQGL 240 KVETEVSKTK EEIFRSFSFS FKGVGSDILE SQFFSDVMKD CDMMGSNSPT FLSPTTSESN 300 YFSSSCQMDN NFGIDNILQT SESDLTDMIS TPTSVISSSP FGDHDFSIDQ VDFDTSFTLD 360 DDLAYFN

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MEKVNPSEQK NLIIELSQGR EMANELRKQL DPVTSPETCE ALVEKIVSTY DKALAMLTWR  60
VLKEEETLPE TGRKESPLFH SPVLTTPITE GSNSSGFSKD QECNKDASKK RKTLPKWSEN  120
VRVCSASGLE GHVDDGHSWR KYGQKDILGA NFPRAYYRCT HRNSRGCLAT KQVQRSDEDP  180
AVFEVTYKGR HSCIQAANSG SAIRSDGKEM HKPKKARSLA REGGNQMGAE QTLQHLGQGL  240
KVETEVSKTK EEIFRSFSFS FKGVGSDILE SQFFSDVMKD CDMMGSNSPT FLSPTTSESN  300
YFSSSCQMDN NFGIDNILQT SESDLTDMIS TPTSVISSSP FGDHDFSIDQ VDFDTSFTLD  360
DDLAYFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.1	3e-45	WRKY family protein