PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027162036.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

C2H2

Protein Properties

Length: 167aa MW: 18722.1 Da PI: 8.8499

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027162036.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	47	69	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H XP_027162036.1 47 FSCNYCRRKFYSSQALGGHQNAH 69 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence
MKTSEGNDGR TADLNPGERL NLYLATNQPS TFGDPDPQSG RIPNKVFSCN YCRRKFYSSQ 60 ALGGHQNAHK RERGAMRSYQ SQFMVAFPVN TSMIRSLGVQ AHSLVHKTDG DRGTMVAKLT 120 EANMGPQMLQ CREETMELMW PGSFRLDQAP PQPKTSNQDE LDLNLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G24625.1	5e-23	C2H2 family protein