PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027162036.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 167aa    MW: 18722.1 Da    PI: 8.8499
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027162036.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.000154769123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C + F ++  L  H++ H
  XP_027162036.1 47 FSCNYCRRKFYSSQALGGHQNAH 69
                    89******************988 PP

Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MKTSEGNDGR TADLNPGERL NLYLATNQPS TFGDPDPQSG RIPNKVFSCN YCRRKFYSSQ  60
ALGGHQNAHK RERGAMRSYQ SQFMVAFPVN TSMIRSLGVQ AHSLVHKTDG DRGTMVAKLT  120
EANMGPQMLQ CREETMELMW PGSFRLDQAP PQPKTSNQDE LDLNLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24625.15e-23C2H2 family protein