PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027162036.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | C2H2 | ||||||||
Protein Properties | Length: 167aa MW: 18722.1 Da PI: 8.8499 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14 | 0.00015 | 47 | 69 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H XP_027162036.1 47 FSCNYCRRKFYSSQALGGHQNAH 69 89******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence |
MKTSEGNDGR TADLNPGERL NLYLATNQPS TFGDPDPQSG RIPNKVFSCN YCRRKFYSSQ 60 ALGGHQNAHK RERGAMRSYQ SQFMVAFPVN TSMIRSLGVQ AHSLVHKTDG DRGTMVAKLT 120 EANMGPQMLQ CREETMELMW PGSFRLDQAP PQPKTSNQDE LDLNLKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24625.1 | 5e-23 | C2H2 family protein |