PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027161849.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TALE

Protein Properties

Length: 670aa MW: 73333.6 Da PI: 5.7573

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027161849.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	3e-09	434	471	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gLt +qV++WF N R + XP_027161849.1 434 FEHflHPYPKDSDKIMLARQTGLTRSQVSNWFINARVR 471 664459******************************88 PP
2	BELL	121.3	4.3e-39	296	367	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+q+lq+k +kLl +++eVdkrYkqy++q+q+v+ssF+++ag g+a+pYt+lAl++iSrhFrcL+dai q+ XP_027161849.1 296 EKQDLQSKMSKLLAMMDEVDKRYKQYYHQMQIVVSSFDVIAGSGAAQPYTALALQTISRHFRCLRDAINVQV 367 6899****************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 670 aa Download sequence
MAAYFPGSEN ERDMSTMLHL RESLSSSYSN APVLPGNLMM YMNYSSSSGS YSGALAGNSQ 60 NHGSSITDLL VASSSKASEQ ENLVDLGGQR IGEHDLTEWK NGRNNMLLMY PGGDAAGVLQ 120 NPQNMQIQGL SLTLSTHVPS GFQVSSLQCS SPNPGYSSLL SANPSIPAVG TGRNGYFENL 180 DSSQSKQSRH IEYVSSGFPG SNSDTARADV SPYGMPSIAR AVPNSKYLKA AQQLLDEVVN 240 VRKALKEHNP KKGAMKDSKE SHGDPKNGES DYPICGSSTN AQESSSNSAS ELSAAEKQDL 300 QSKMSKLLAM MDEVDKRYKQ YYHQMQIVVS SFDVIAGSGA AQPYTALALQ TISRHFRCLR 360 DAINVQVQVT RRSLGEQDAS TSSKAIGISR LRYVDQQIKQ QRALQQLGMM QQHAWRPQRG 420 LPESSVTVLR AWLFEHFLHP YPKDSDKIML ARQTGLTRSQ VSNWFINARV RLWKPMVEEM 480 YKEEAVDAEM DSNSSSDIAG KTVVGDVKES EGRGEDILQS TTSTVTERCS AEQLIESKSD 540 YFPDVEMMET NIGRPFQNDS NVLPDTAVVQ SIEGNGRYMV ASAAAYHMSE LERFENGSGV 600 SLTLGLQHSD GGTVRMPIQT YQNYIPMRGD DKCSVAAPSM GVQAADFDCM DSGNQQNRFA 660 SSQTLHDFVA

Sequence ? help Back to Top

Protein Sequence Length: 670 aa Download sequence

MAAYFPGSEN ERDMSTMLHL RESLSSSYSN APVLPGNLMM YMNYSSSSGS YSGALAGNSQ  60
NHGSSITDLL VASSSKASEQ ENLVDLGGQR IGEHDLTEWK NGRNNMLLMY PGGDAAGVLQ  120
NPQNMQIQGL SLTLSTHVPS GFQVSSLQCS SPNPGYSSLL SANPSIPAVG TGRNGYFENL  180
DSSQSKQSRH IEYVSSGFPG SNSDTARADV SPYGMPSIAR AVPNSKYLKA AQQLLDEVVN  240
VRKALKEHNP KKGAMKDSKE SHGDPKNGES DYPICGSSTN AQESSSNSAS ELSAAEKQDL  300
QSKMSKLLAM MDEVDKRYKQ YYHQMQIVVS SFDVIAGSGA AQPYTALALQ TISRHFRCLR  360
DAINVQVQVT RRSLGEQDAS TSSKAIGISR LRYVDQQIKQ QRALQQLGMM QQHAWRPQRG  420
LPESSVTVLR AWLFEHFLHP YPKDSDKIML ARQTGLTRSQ VSNWFINARV RLWKPMVEEM  480
YKEEAVDAEM DSNSSSDIAG KTVVGDVKES EGRGEDILQS TTSTVTERCS AEQLIESKSD  540
YFPDVEMMET NIGRPFQNDS NVLPDTAVVQ SIEGNGRYMV ASAAAYHMSE LERFENGSGV  600
SLTLGLQHSD GGTVRMPIQT YQNYIPMRGD DKCSVAAPSM GVQAADFDCM DSGNQQNRFA  660
SSQTLHDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	1e-128	TALE family protein