PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027161429.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 254aa MW: 29591.7 Da PI: 7.2371 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 55.9 | 7.7e-18 | 22 | 113 | 2 | 100 |
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 fk++ + l ++rl +p +f+++ g +k ++le++ g+ W+vk+ ++ +g ++l++ W++Fv++n L+e Df++F++++ ++f + XP_027161429.1 22 FKIF---NQLVENRLKIPPQFVRDVliG----IPKRIILETSYGNCWSVKV-VKTDDGDVFLGDDWQKFVEDNLLQEHDFLLFHYEHGdRCF--T 106 5555...3344578********999644....4457***************.4666666**************************9765888..* PP EEEE-SS CS B3 94 vkvfrks 100 v++f+ks XP_027161429.1 107 VQIFDKS 113 ****985 PP | |||||||
2 | B3 | 74.4 | 1.4e-23 | 171 | 251 | 10 | 96 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 v+ ++++pk+fae+h +k +++++l++ +g++Wev++ + ++g +v+ +GW +Fv++n+Lk g +++F+l+g++ v++ XP_027161429.1 171 VNPPFLMIIPKSFAEKHFQK--AKTKIRLKNIEGKEWEVNY--TINGGNFVFVGGWTRFVRDNKLKIGNVCIFELIGEKVL--QVHI 251 3444789**********655..3458***************..999999***************************96655..6665 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 254 aa Download sequence |
MVNKSLGKDK DEIILDQRPA FFKIFNQLVE NRLKIPPQFV RDVLIGIPKR IILETSYGNC 60 WSVKVVKTDD GDVFLGDDWQ KFVEDNLLQE HDFLLFHYEH GDRCFTVQIF DKSGVERTNQ 120 EVANSGTKNL DQHTTHVQPR EKSQSREEGA TLQEFCSQHP FFETNIKRYN VNPPFLMIIP 180 KSFAEKHFQK AKTKIRLKNI EGKEWEVNYT INGGNFVFVG GWTRFVRDNK LKIGNVCIFE 240 LIGEKVLQVH ISDD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G18000.1 | 1e-20 | B3 family protein |