PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027161425.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 298aa    MW: 33188.9 Da    PI: 4.9345
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027161425.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP269.37.2e-22119169155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +grW+AeIrdp++   +kr++lg+++t+eeAa a+++a+ kl+g
  XP_027161425.1 119 KKFRGVRQRP-WGRWAAEIRDPKW---KKRVWLGTYDTPEEAASAYDRAAVKLKG 169
                     59********.**********988...7************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MEIGISPQSP MYSRQRVKFS EHVVTTNKPI DDRRSLTPSG QSLTVVRQKV VRIIYTDADA  60
TDSSDDEEET RNVRRVKRHV EEINFGPPPK TTKIEQQRNG KRSLQSLTPP AEPDVSSRKK  120
FRGVRQRPWG RWAAEIRDPK WKKRVWLGTY DTPEEAASAY DRAAVKLKGP DAVTNFPVES  180
IKGTVGGTCQ SEKSSESATS EDVALSPTSV LRYDDTTSQT ETEVSVGIGT SDAVSSATSV  240
LRCCDGLTPF ANFPFPEFDD LGLGADFPLS WPPMEPSGKN YAEEFGEFDF DDFLVEVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61630.13e-31ERF family protein