PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027160093.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 307aa    MW: 33189.4 Da    PI: 6.6493
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027160093.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-18119169256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr +  +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g+
  XP_027160093.1 119 TYRGVRKRN-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKGH 169
                     69****887.**********843...6***********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MLSLAASRTP QLIIMGKQIN IGSLSHHDSN LSSSSTTTTT TSSSSSFSTT SNALNSPSTT  60
STSSSPSSQS TKATTSTRTA KASKAQESSQ ELQQVAKING NENQPRKKHK NGDDEKHPTY  120
RGVRKRNWGK WVSEIREPRK KSRIWLGTYP TAEMAARAHD VAALAIKGHS AYLNFPHVAH  180
ELPRPATTSP KDIQAAAAKA AAATFPGENG GGAEAEPIQA ELTNCHSSTD LSLHNMQESS  240
NSPSTDDDID DTFFDLPDLS FDVTGATDHL DGFNCFNGSS SWWPQLHLAP AAEPVFRLEE  300
PFLWECY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.11e-47ERF family protein