PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027159703.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GATA
Protein Properties Length: 339aa    MW: 37382.8 Da    PI: 7.3295
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027159703.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.11.2e-18257290134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs+C++ kTp+WR gp g+ktLCnaCG++y++ +
  XP_027159703.1 257 CSHCQVNKTPQWRTGPLGPKTLCNACGVRYKSGR 290
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MDCMEAKALK SSLLSDIGVM KPSQQQGFVD DIWCVTGLNN VSCDDFSVDD LLDFSDKDFK  60
DGPLKEDEDF KDTLSLSSSQ HHHHHHHRNS NFSSFSETDD FGSLLAAELA VPAEEMENLE  120
WLSQFVDDSR SEVSLLCPAG SFKDNKGRLT EKWSEPAVHM IRVPCFPLHV PVKPRSKRSR  180
PNGRVWSGSP SLTTTESSST SSSSYGSSAL SPFILSNPVQ DSETLSSVEK PPAKKQKKKP  240
ATDTGSGSIG SQTSRRCSHC QVNKTPQWRT GPLGPKTLCN ACGVRYKSGR LFPEYRPACS  300
PTFSQEAHSN SHRKVLEMRR KKEATGHVEA GLTPMVSSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.23e-51GATA family protein