PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027158766.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 369aa MW: 40422.9 Da PI: 5.2174 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 48.4 | 1.3e-15 | 210 | 246 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+++ Tp +Rrgp g++tLCnaCGl+++ kg+ XP_027158766.1 210 CQHCGVSEksTPAMRRGPGGPRTLCNACGLMWANKGT 246 **********************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 369 aa Download sequence |
MASTMNGRRR HTRPYKDRYV NVPFQVDEDG SAGGFDADDI GAVDERINSG AREMRAVNSM 60 PIATILTSPG GAPMASRTSE LTISFEGEVY VFPAVPPEKV QAVLLLLGGR DVPRSIPSSE 120 FLLQQNCKTT DDGSSQPNVS RRIASLVRFR EKRKERCFEK KIRYTCRKEV AQRMHRRNGQ 180 FASLKDAGKA AENWESGEGT PHQEHVSRRC QHCGVSEKST PAMRRGPGGP RTLCNACGLM 240 WANKGTLRDL TKGGRSACFD QSDPETPEMK ASSMEPENSY HNQDEEGSSE DAKPMFVESG 300 CPSLRPNAQD LLETAQGLSG DSPVGLGNSS INLDGQETLD ELANASGTEF EIPSNFDEQV 360 WLSSNADLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G21175.2 | 8e-56 | GATA family protein |