PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027158419.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 299aa    MW: 32857.3 Da    PI: 8.6102
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027158419.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.4e-202878256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  XP_027158419.1 28 RFVGVRQRP-SGRWVAEIKDSS---QRIRLWLGTYDTPEEAARAYDEAARALRGE 78
                    589******.7*********43...36**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MAGSETTKTP TNTISTKKAQ PTTSTTRRFV GVRQRPSGRW VAEIKDSSQR IRLWLGTYDT  60
PEEAARAYDE AARALRGENA RTNFAAANPP NLSQSGSSPS TGAVNIPESD ARHGMSFSSL  120
KAKLSKNLQS IMARTSETKS SKSRVSDHFT FASIFHFRGQ YQRPVDIKNI EKVVQPSVIV  180
PHASDKPFSW ESSSVSDCSN EWIGLRQHGF DSDGSDVSEA YLGDQMMGWM SSPEVSEGSR  240
SKRFKVSSSV VIPSTFAESP LSGTPRFCES PYSGTPRFCD SPFSNSTPSF CDFPYNEEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-17ERF family protein