PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027157973.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 234aa MW: 26290 Da PI: 4.5573 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.2 | 2.4e-19 | 91 | 141 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+++AeIrd + ng r+++g+f+taeeAa +++a+ +l+g+ XP_027157973.1 91 YRGVRRRP-WGKYAAEIRDSTRNG--VRVWIGTFDTAEEAALVYDQAAFALRGH 141 9*******.**********44465..**************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 234 aa Download sequence |
MDYSSFPQHS FAEFPPESSA SSSMYCDNSQ HCQSSLPFNE NDSQEMLLAR VISEAAGSGN 60 SMDAPSSSRI KEEEECAQQN DYDEPMNQVS YRGVRRRPWG KYAAEIRDST RNGVRVWIGT 120 FDTAEEAALV YDQAAFALRG HAAVLNFPVE VVYESLKQMQ YGFEEGCSPV LVMKKRHSMN 180 RRNALSKKRS QVLMGLDDDN NNNVLVLEDL GTDYLEELLG ASESTSSSCP WRHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G23240.1 | 3e-57 | ERF family protein |