PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027157591.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 809aa MW: 93954.6 Da PI: 8.2953

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027157591.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.9	4.6e-20	99	189	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn YAk GF +rks+ k+ +g r++vC +eg+r+e+ + ++++r+ ++ trtgC a+++vk + + k++vt++ eHnH+la XP_027157591.1 99 EFYNLYAKLSGFGIRKSNGKRD-ADGISRFRKWVCCCEGYRNEKWFNyEDRKREAKPITRTGCGACFRVKYDIeSVKYVVTRFIMEHNHPLA 189 6*************998887.8998999********9988867889999************98899************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 809 aa Download sequence
MQRRGTEVEK SKVSTFVHNF ETHDMVQETE NGRMGMDGCG RLRSFDLNQE PECDRHTFIE 60 ESGGSIGGHE DEEANELVGA IGVDDVMKLT FDTEEEAGEF YNLYAKLSGF GIRKSNGKRD 120 ADGISRFRKW VCCCEGYRNE KWFNYEDRKR EAKPITRTGC GACFRVKYDI ESVKYVVTRF 180 IMEHNHPLAS EASVQHIRSH RKVSDAEYAQ AKSLKLVGAR ICQIMKHFVI KAGGYSNVGF 240 CIKDLYNRMD EERRKDIFNG DAEGALGFLA AKKDADEMFF YKYDVDNEGR LARLFWADSK 300 SRADFSVFGD VLVFDTTYKT NKYRKPLVVL AGVNNHLNST IFGCALLSDE RIETYEWVLS 360 TFVEAMKGRK PVAVMTDGDS AMRRAIKNLL PDACHRLCSW HLHRNARSNI RCEEFNNRLY 420 NLMERKCSTL EFEDRWARLV NECGVVENEW VKELYRRRRL WAEAYLRGNF FAGMRSTQRC 480 EKMNAFLNEY LNEKMRLYEF VRSFDLAIAW LRHTESKAIH TSENTKPVLT TILPELEWSA 540 AEVFTRNVFF MVRKHLNRQG LLISEGWSED GGSRTYYYSK YGGHGISWRV DYDRSMENLI 600 CSCMKFESKG IPCAHMFRVM VVEGMNRIPE ACISKRWTKG VYCSNNGMKA FVADEQLTQM 660 ARYGTLKSSC NTMCYYASYM DDAFNDLQQM FDKHSVDLKE KWIDRGYGGD GFAMDSRVRN 720 DRSRRTFGLL DPRVSRCKGD HKHAEAKKKR KCGHCRYYRN CIQVERDGMV VHGSSSRDDR 780 QVTEQHRLEG LSFVMYRWGE EYSRLLGHG

Sequence ? help Back to Top

Protein Sequence Length: 809 aa Download sequence

MQRRGTEVEK SKVSTFVHNF ETHDMVQETE NGRMGMDGCG RLRSFDLNQE PECDRHTFIE  60
ESGGSIGGHE DEEANELVGA IGVDDVMKLT FDTEEEAGEF YNLYAKLSGF GIRKSNGKRD  120
ADGISRFRKW VCCCEGYRNE KWFNYEDRKR EAKPITRTGC GACFRVKYDI ESVKYVVTRF  180
IMEHNHPLAS EASVQHIRSH RKVSDAEYAQ AKSLKLVGAR ICQIMKHFVI KAGGYSNVGF  240
CIKDLYNRMD EERRKDIFNG DAEGALGFLA AKKDADEMFF YKYDVDNEGR LARLFWADSK  300
SRADFSVFGD VLVFDTTYKT NKYRKPLVVL AGVNNHLNST IFGCALLSDE RIETYEWVLS  360
TFVEAMKGRK PVAVMTDGDS AMRRAIKNLL PDACHRLCSW HLHRNARSNI RCEEFNNRLY  420
NLMERKCSTL EFEDRWARLV NECGVVENEW VKELYRRRRL WAEAYLRGNF FAGMRSTQRC  480
EKMNAFLNEY LNEKMRLYEF VRSFDLAIAW LRHTESKAIH TSENTKPVLT TILPELEWSA  540
AEVFTRNVFF MVRKHLNRQG LLISEGWSED GGSRTYYYSK YGGHGISWRV DYDRSMENLI  600
CSCMKFESKG IPCAHMFRVM VVEGMNRIPE ACISKRWTKG VYCSNNGMKA FVADEQLTQM  660
ARYGTLKSSC NTMCYYASYM DDAFNDLQQM FDKHSVDLKE KWIDRGYGGD GFAMDSRVRN  720
DRSRRTFGLL DPRVSRCKGD HKHAEAKKKR KCGHCRYYRN CIQVERDGMV VHGSSSRDDR  780
QVTEQHRLEG LSFVMYRWGE EYSRLLGHG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	455	460	YRRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-97	FAR1 family protein