PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027157535.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 846aa MW: 98212 Da PI: 8.5351 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 64.7 | 2.6e-20 | 88 | 178 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn YAk GF +rks+ k+ +g r++vC +eg+r+e+ + ++++r+ ++ trtgC a+++vk + + k++vt++ eHnH+la XP_027157535.1 88 EFYNLYAKLSGFGIRKSNAKRD-ADGISRFRKWVCCCEGYRNEKWFNyEDRKREAKPITRTGCGACFRVKYDIeSVKYVVTRFIMEHNHPLA 178 6****************98887.8998999************9988867889999****************98899**************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 846 aa Download sequence |
MGQDGALKTQ LMTWCRKQRI NQMALDVCGR LRSFDLNQEP ECDRDTFIEE SGGSIGGHED 60 EEADELVGAI GVDDVMKLTF DTEEEAGEFY NLYAKLSGFG IRKSNAKRDA DGISRFRKWV 120 CCCEGYRNEK WFNYEDRKRE AKPITRTGCG ACFRVKYDIE SVKYVVTRFI MEHNHPLASE 180 ASVQHIRSHR KVSDAEYAQA KSLKLVGARI CQIMKHFVIK AGGYSNVGFC IKDLYNRMDE 240 ERRKDIFNGD AEGALGFLAA KKDADDMFFY KYHVDNEGRL AMLFWADSKS RADFSVFGDV 300 LVFDTTYKTN KYRKPLVVLA GVNNHLNSTV FGCALLSDER IETYEWVLST FVEAMKGRKP 360 VAVMTDGDSA MRRAIKNLLP DACHRLCSWH LHRNARSNIR CEEFNNRFYN LMARKCSTLE 420 FEDRWARLVN ECGVVENEWV KKLYRRRRLW AEAYLRGHFF AGMRSTQRCE KMNAFLNEYL 480 NEKMRLYEFV RSFDLAIAWL RHTESKAVHT SENTKPVLTT ILPELEGSAA EVFTRNVFFM 540 VRKHLNRQGL LISEGWSEDG GNRTYYYSKY GGHEISWRVD YDRSMEKLIC SCMKFESKGI 600 PCAHMFRVMV VEGMNRIPEA CISKRWTKGV HCSNNGMKEF VADEQLTQMA RYGTLKSSCN 660 TMCYYASYMD DAFNDLQQMF DKHSVDLKEK WIDRGYGGDG FAMDSRVRND RSRRTFGLLD 720 PRVSRCKGDH KHAEAKKKRK CGHCRYYRNC ILTNDLTCDI WVEDCKQATT NEHAHTKRIR 780 TTQQLMMIIW KTVWMTRWKN HLKLVRAAAT QANGEDKHLY HNHSVAVEGT QVANKEVQEK 840 DEALLL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 444 | 449 | YRRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 4e-98 | FAR1 family protein |