PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027156600.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 839aa    MW: 96268.6 Da    PI: 7.7202
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027156600.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR174.62e-2326113189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     kfYn+YA ++GFsvrk++ +k  ++g +t+r++ C keg +++ + + +  +rtra t+tgC ak+++ + + + k++v++l+leHnHel
  XP_027156600.1  26 KFYNKYAFKMGFSVRKDYLNKD-KDGVTTSRRYSCCKEGVKRKYEGD-VMPKRTRAPTKTGCGAKMVIVLFRgTMKYRVHDLVLEHNHEL 113
                     6*****************9998.8999****************9999.999*******************999****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 839 aa     Download sequence    
MDCSKLAENG TPELGMEFNS EEDAYKFYNK YAFKMGFSVR KDYLNKDKDG VTTSRRYSCC  60
KEGVKRKYEG DVMPKRTRAP TKTGCGAKMV IVLFRGTMKY RVHDLVLEHN HELHIAQCAH  120
MMPSQRKVSV AQGFQAEISE DAGLSLKQSH ELMGTEAGGM GNVGYTRDDL KRYLRTRRER  180
SLKYGEAGSM LNYFQEQTLE NPSFFHAVQL DCEEQITNIF WADAGMLIDY NFFGDVVTFD  240
TTYKTNKEYR PLGVFVGFNQ HRQIVIFGAA LMYDETIDSF KWVFGTFLEA MCGKHPSTIL  300
TDQDHAMAAA LSIVMPETFH GLCTFHIRRN FMKHLGNHYK ENSDLPYMFG ACMYEFEEVE  360
QFNRVWEAMV KKHNLENNEW LSGLYKIRDK WARCMMKERW TAGMRSTQLS ESLNAAIKNH  420
LKLDHDLVQF FRHFNRVVDE KRHNELIAEY EMRQKLPMVG LRQTPMLVHA SETYSPTVFV  480
AFQNEYGEST AMVILRQQDA AMFVEFAVMR YDGGPERTVV FNRNDLSVRC SCKKYENEGI  540
LCGHALKVFD TVGIKIIPPE YIKRRWTKRA RAGDCFDRRG QEVVADPKVM ISTRYRELAP  600
AMIKVATRAA MSEDTSKVAI TVISDLSKRV ELLLSESEEQ PLQNQKNLNM EERDKIEIVN  660
EMGEAVVARG IKKRGGGKKS RVMRSWVDKF DRVKRKSRLS RTTQTTVSES EPTSISFEEY  720
MFMGCRSSTD SVSTHSMSQT VNGPPNAVAP DIDESQTVHR LANQGPPASV PTEWMHPRFS  780
IFSKHNSVRD VLMEERGAIS THCDVDAYHV FAPSPQERNN TQGLQLRVDV ASPQNEVDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-108FAR1 family protein