PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027156236.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 287aa    MW: 31846 Da    PI: 8.603
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027156236.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.2e-20114164255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd      k +r +lg+fgtaeeAa a+++a++k++g
  XP_027156236.1 114 HYRGVRRRP-WGKYAAEIRDS---SrKGARLWLGTFGTAEEAAMAYDKAALKIRG 164
                     7********.**********3...2234*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MAQDEKSTIL ENVWANYIAK SELENAHQNP VESSQTWHDL PGLNSRDGSL LERLPSLGRF  60
ISMGAEAWEQ LLDGANLPNN TESSRTVHSQ ETCSSKKMDS GADEIKVKKV VTRHYRGVRR  120
RPWGKYAAEI RDSSRKGARL WLGTFGTAEE AAMAYDKAAL KIRGPKAYLN FPLETVAEAM  180
GTCKSIPQDY MDSSATSCQT NDTTTSASVT CGEIMKDLKD DGGSSSFLHP RHKSRLIFAR  240
WSAQQFLSPR VLQLTIPFSV LGTSYPLDLI KVRAILGAFL HQLQSHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.15e-32ERF family protein