PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027155728.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | HB-other | ||||||||
Protein Properties | Length: 119aa MW: 14039 Da PI: 6.7752 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 54.2 | 2.5e-17 | 11 | 65 | 6 | 56 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 t+t++ql +Lee++++++ypsa++r+++ + + +++++++kvWFqNrR +k XP_027155728.1 11 TYTDKQLVALEEMYAQCPYPSASQRQQMKHDClalkDVEDEKIKVWFQNRRSLDK 65 79*************************************************8665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 119 aa Download sequence |
MANSGSSGNI TYTDKQLVAL EEMYAQCPYP SASQRQQMKH DCLALKDVED EKIKVWFQNR 60 RSLDKLEKDN AEFHLVRERL IATHSLLKEE NDKLKQTVMD LLYENDYLQQ NCRMRVKNL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32880.1 | 1e-27 | HD-ZIP family protein |