PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027155335.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 799aa MW: 92526.5 Da PI: 7.6226 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 78.7 | 1.1e-24 | 70 | 158 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YAk GF +r sk +k k+++ + +r f+Cs+egk+ ++k++ + +r+etr++C a++k++ ++ +k++v +++ eHnHel+ XP_027155335.1 70 NFYQKYAKASGFGTRLSKGHKDKNSDLMLDRVFCCSREGKKPKDKRN-MIVKCPRPETRCDCSARMKISCRQGEKYRVVQFVAEHNHELS 158 6******************************************9999.99999***********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 799 aa Download sequence |
MENDLPTHEV QSCRKLDFED VDLQEINDNA LPLCITDGNR GNQIFLPLAI PDDLVPKLDM 60 EFDTEVAAKN FYQKYAKASG FGTRLSKGHK DKNSDLMLDR VFCCSREGKK PKDKRNMIVK 120 CPRPETRCDC SARMKISCRQ GEKYRVVQFV AEHNHELSTP SKTHLFRSHR HLTMAHEAEI 180 DMARSCGITP KQSIELMSKQ VGGRENLGFI RDDLKNYLRS KRSIPMMQGD TGGVLEYLQG 240 MQLEDPNFFY AIQVDEDDLI TNIFWADAKM RTDFAHFGDV VCFDTTYRKH KDGRPIALFV 300 GVNHHKQTTV FGAALLYDET ILTFEWLFDT FAKAMMGKIP RTILTDQDGR MATALASQWP 360 TTYHRLCIWH IYQNAATHLA DVFKDFQNFA TDFSHCIYDY ENEDDFFEGW SEMLKTYGLE 420 DNKWLKKMFD IKEKWALVYG RETFCADMTT TQRSESMNSV IKKYVSYKHG LLEFFEHFQR 480 LLDDRRYNES VADFKGNQST PAMTFSCRIL QHAASVYTHE VYENFKEELC KGIDCKWEVD 540 GDLGNQMSYR VTPHGKTSHH LVTYDSSTNS ICCSCKKFEF AGFLCSHALK ILMTLNIVTI 600 PDAYILKRWT KAAKTGNVHV SSESSPEMEL KAKLSFRYKE LSYLYMQLMT KASECDEAYQ 660 IAKDGFWKMS EQMDACCQGK KKMKEVRIEE HCSVYQDVDT NPSEIAYNKI KGIKVKEKVT 720 YKSSKRPRSA LEMATKKRKY KVKEKFSSKR LQEFGISIED IYNRRNPTNM TQLLQTLDPN 780 LTQGYDLMSS SSIAHHQHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G15090.1 | 1e-136 | FAR1 family protein |