PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027155325.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 262aa    MW: 29334.7 Da    PI: 8.9031
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027155325.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.000185476123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_027155325.1 54 YSCTFCRREFRSAQALGGHMNVH 76
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MQYMMWMKSK QLLNSRFQSS VGSFNTSSSS WEEQAFAEDA AGPLGGFVWP PRSYSCTFCR  60
REFRSAQALG GHMNVHRRDR ARLKQSLCSD QTPSSAPEIQ QSPQAGDSSS PFSSVSRASA  120
TVISQETSSE EAYVSPFSSS ITKEQQRLFP YLSSPDSRNG IRKSARKEEL LVLDRRDHAA  180
VETNLSVGIN SHNTQGSSLH NEEMAINSKR VRSNASFPVY HKPCSSDRFP FQYEMLRMKM  240
SRASSIEDID LELRLGDPPA VK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06070.13e-27C2H2 family protein