PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027155251.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WOX

Protein Properties

Length: 173aa MW: 19696 Da PI: 8.8166

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027155251.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.5	7.4e-21	21	82	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L +lF++ r+ps++++++++++l +++ ++V++WFqN++a+e++ XP_027155251.1 21 KCGRWNPTSEQVKVLTDLFRSgLRTPSTDQIQKISSQLsfygKIESKNVFYWFQNHKARERQ 82 568***************99************************************97 PP
2	Wus_type_Homeobox	114.3	6.1e-37	21	84	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L++l++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ XP_027155251.1 21 KCGRWNPTSEQVKVLTDLFRSGLRTPSTDQIQKISSQLSFYGKIESKNVFYWFQNHKARERQKR 84 678***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence
MDEGFCIKPR GGGYVGGGGT KCGRWNPTSE QVKVLTDLFR SGLRTPSTDQ IQKISSQLSF 60 YGKIESKNVF YWFQNHKARE RQKRRRVSID EQKENHYQGK NSSSITHFAE INQISEPERV 120 IETLQLFPLN SFGTESEAEK QLRFFANDCK GTASFSYGMG AEMDHPTLDL RLS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	83	87	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	2e-54	WOX family protein