PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027155173.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 353aa    MW: 37730 Da    PI: 6.0234
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027155173.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.3e-1772121255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aa+a+++a+  l+g
  XP_027155173.1  72 RYRGVRQRS-WGKWVAEIREPRK---RTRRWLGTFATAEDAARAYDRAAIILYG 121
                     59****999.**********954...5999*******************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MSNSTADHLT SHLSQDTDPT LNYSISNNDN ATAAAANATT TSSGSDLSSG STSSNNNKKG  60
KGKGGPDNNK FRYRGVRQRS WGKWVAEIRE PRKRTRRWLG TFATAEDAAR AYDRAAIILY  120
GSRAQLNLQP SSGTGGESGG APSDQSSSRS SNSSSSTQSL RPLLPRPSGF GLTFYSAPAS  180
LPVAGGVVAG YAPYGYYPTT VQQYPNMVQC QQNLALQEPQ PQRQQPEDYR TSTTARNHDM  240
NVVLGIVDSS SYITTTSGAN PNHEQQQQEQ QYCHNPSKLL YDEVNSLVGS VGSSLSLCCT  300
QTGAAAPAPS VSECSDPTVS GCPGSPPLWP LTNDDEYPPT SIWDYGDPSV FDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.12e-22ERF family protein