PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027155074.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 785aa MW: 91002.8 Da PI: 8.3071 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 64.8 | 2.3e-20 | 88 | 178 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn YAk GF +rks+ k+ +g r++vC +eg+r+e+ + ++++r+ ++ trtgC a+++vk + + k++vt++ eHnH+la XP_027155074.1 88 EFYNLYAKLSGFGIRKSNAKRD-ADGISRFRKWVCCCEGYRNEKWFNyEDRKREAKPITRTGCGACFRVKYDIeSVKYVVTRFIMEHNHPLA 178 6****************98887.8998999************9988867889999****************98899**************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 785 aa Download sequence |
MGQDGALKTQ LMTWCRKQRI NQMALDVCGR LRSFDLNQEP ECDRDTFIEE SGGSIGGHED 60 EEADELVGAI GVDDVMKLTF DTEEEAGEFY NLYAKLSGFG IRKSNAKRDA DGISRFRKWV 120 CCCEGYRNEK WFNYEDRKRE AKPITRTGCG ACFRVKYDIE SVKYVVTRFI MEHNHPLASE 180 ASVQHIRSHR KVSDAEYAQA KSLKLVGARI CQIMKHFVIK AGGYSNVGFC IKDLYNRMDE 240 ERRKDIFNGD AEGALGFLAA KKDADDMFFY KYHVDNEGRL AWLFWADSKS RADFSVFGDV 300 LVFDTTYKTN KYHKPLVVLA GVNNHLNSTI FGCALLSDER IETYEWVLST FVEAMKGRKP 360 VAVMTDGDSA IRRAIKNLLP DACHRLCSWH LHRNARSNIR CEEFNNRFYN LMARKCSTLE 420 FEDRWARLVN ECGVVENEWV KKLYRRRRLW AEAYLRDHFF AGMRSTQRCE KMNAFLNEYL 480 NEKMRLYEFV RSFDLAIAWL RHTESKAVYT SENIKPVLTT ILPELEGSAA EVFTRNVFFM 540 VRKHLNRQEL LISEGWSEDG GSRTYYYSKY GGHEISWRVD YDRSMEKLIC SCMKFESKGI 600 PCAHMFRVMV VEGMNRIPEA CISKRWTKGV HCTNNGMKAF VADEQLTQMA RYDTLKSSCN 660 TMCYYASYMD DAFNDLQQMF DKHSVDLKEK WIDRGYGGDG FAMDSRVRND RSRRTFGLLD 720 PRVSRSKGDH KHAEAKKKRK CGHCRCEMQR LKEMVWLCME VAAVTTDRLQ SNTGLGIVFC 780 YVSVG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 444 | 449 | YRRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-99 | FAR1 family protein |