PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027155032.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 381aa MW: 41231.2 Da PI: 6.628

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027155032.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	91.7	5.7e-29	186	246	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK++ +s+fprsY+rCt++ +Cp+kk v+r ++dp+++e+tY+g+H+++ XP_027155032.1 186 EDGYTWRKYGQKDILNSRFPRSYFRCTHQklyQCPAKKLVQRLDDDPNIFEVTYRGDHTCH 246 7**************************9999************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MDETIDLILQ GCQMAKSLEG SLPNMTNQPE SLISSCDEII RAFSRAKESI SKAQLAVLPE 60 SHKSQLLGIS SGVQEWLRDS SIQTRAMDLL RAQQLLPDDT KLKGAIGGGL DEMVVDQMGG 120 GGRFGGRHSL ERAREIEPPA VEAASSGGGR ASSSQRQRKR CRDGGVERRV ERVPAPQMGN 180 TEIPPEDGYT WRKYGQKDIL NSRFPRSYFR CTHQKLYQCP AKKLVQRLDD DPNIFEVTYR 240 GDHTCHLSST APSVPPPLPV ERREAHSMMQ QATAAAIHSL PNPTTNTTLS MSQWLTISDF 300 GLAVAGGGVV GSTSSTVNMG SSTSGGAAAG PSTSRYGRDV DYPVADMADV MFNSGSSSST 360 SMDLIFSSMD DKWPDSADKK N

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MDETIDLILQ GCQMAKSLEG SLPNMTNQPE SLISSCDEII RAFSRAKESI SKAQLAVLPE  60
SHKSQLLGIS SGVQEWLRDS SIQTRAMDLL RAQQLLPDDT KLKGAIGGGL DEMVVDQMGG  120
GGRFGGRHSL ERAREIEPPA VEAASSGGGR ASSSQRQRKR CRDGGVERRV ERVPAPQMGN  180
TEIPPEDGYT WRKYGQKDIL NSRFPRSYFR CTHQKLYQCP AKKLVQRLDD DPNIFEVTYR  240
GDHTCHLSST APSVPPPLPV ERREAHSMMQ QATAAAIHSL PNPTTNTTLS MSQWLTISDF  300
GLAVAGGGVV GSTSSTVNMG SSTSGGAAAG PSTSRYGRDV DYPVADMADV MFNSGSSSST  360
SMDLIFSSMD DKWPDSADKK N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40740.1	2e-46	WRKY family protein