PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027154809.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NF-X1 | ||||||||
Protein Properties | Length: 389aa MW: 43197.8 Da PI: 8.2768 | ||||||||
Description | NF-X1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-NF-X1 | 17.1 | 1.2e-05 | 184 | 202 | 1 | 20 |
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG H C lCH+GpCp+Cp+ XP_027154809.1 184 CG-HECLLLCHPGPCPSCPK 202 **.***************96 PP | |||||||
2 | zf-NF-X1 | 17.6 | 8.5e-06 | 289 | 308 | 1 | 20 |
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG+H C++ CH+G+C++Cp+ XP_027154809.1 289 CGRHVCERGCHKGNCGECPL 308 ******************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 389 aa Download sequence |
MATSNTTLLP PLSPPSSDSD SDSGTSSRQH QHTDLSSTIF KSYLELTGHQ SSPQHQDLIK 60 IQSFLTSSRS GALSCLICLE RIKPTDPTWS CSSRCFAVFH LLCIQSWAHQ SSNLAAARAA 120 SRAATLNDDT LRWHCPKCRI EYPKSQTPKY YYYFCGKLEN PPHDPWILPH SCGEICGRPL 180 TYNCGHECLL LCHPGPCPSC PKLVKTKCYC GAKEDVRRCG FKDFSCKGVC RKTLACGSHR 240 CGEICHDCDC PMCRKKGVYK CQCGKVELER ECCERIFRCE NPCQKLLGCG RHVCERGCHK 300 GNCGECPLQG KRTCPCGKRV YEGMACDVAV PLCGATCDKL LSCGFHRCPE RCHRGPCIET 360 CRTVVTKSCR CGSARKQIPC YQDSTKEKG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05660.1 | 1e-148 | NF-X1 family protein |