PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027154157.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ZF-HD | ||||||||
Protein Properties | Length: 339aa MW: 37242.8 Da PI: 6.9195 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 103.6 | 1.3e-32 | 47 | 105 | 2 | 59 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 ++v Y+eClkNhAa++Ggha+DGCgEfmp ++++ +++++l+CaACgCHRnFHRreve+ XP_027154157.1 47 TAVAYRECLKNHAANIGGHALDGCGEFMPCPTATaADPTSLNCAACGCHRNFHRREVEY 105 5799**************************999999********************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence |
MGLTNISTPT TTPDTDNDTP PHTQPIRSFS FTNGSSKYHH RQPPPQTAVA YRECLKNHAA 60 NIGGHALDGC GEFMPCPTAT AADPTSLNCA ACGCHRNFHR REVEYSPFIT TTAAPHFLDF 120 RQHRRSSSSP SPPPQQPPTL SYPPTQMLLA LSTAAHDDQQ VPNHHQVATP VTPRETKAAA 180 ENLSGRKRFR TKFSQEQKEK MHSFAEKMGW KMQKCDDNMV QNFCNEIGVA RGVLKVWMHN 240 NKNTVGRRDI SSTITITNPA AATANITEED KSNSNNIRHH GGIGGSPENG GYNINNSCIN 300 NDEEENSESH YCNNESGHAN LDLDLDLDHN NTNGSSSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15210.1 | 5e-57 | ZF-HD family protein |