PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027153916.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 253aa MW: 28936.7 Da PI: 8.9995 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.4 | 0.00048 | 98 | 119 | 3 | 23 |
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 C+ C+++++++ +L H + H XP_027153916.1 98 CSVCSRVYPTSRLLSIHVSEvH 119 *****************99877 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 253 aa Download sequence |
MATEVEVSRE DQLKFPYWSP IRRRFDPESS FFAAGNVERE LLAKQVALDL TEEEKLQFRN 60 MEDEESSKLY CPLVGCGAHL RSLDEFEDHY TSRHSAACSV CSRVYPTSRL LSIHVSEVHD 120 SFFQAKVARG FAMYECLVEG CGLKLKSYKG RQQHLVDKHK FPTSFEFFKK AHPSKKQRKK 180 DQHKQAFGTK EAASRAMQME EDTMDNLVSA VSKLSTSDSP SSISFGRRHN RGLTFVPRAV 240 RQAKEPESSA RRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G14140.1 | 1e-114 | C2H2 family protein |