PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027153820.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 423aa MW: 46810.9 Da PI: 5.0273

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027153820.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	102	7.9e-32	55	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee....vikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tk 79 lp+G++F+P+d el+ e+L++k+ + e ++ +i++++ i++++P++Lp +k++ + ++fF ++ ++yatg+rk+r+ + XP_027153820.1 55 LPAGVKFDPSDAELL-EHLAAKCGVGNSESHKfideFIPTLEgdegICYTHPENLP-GAKKDGSTVHFFYRTTNAYATGQRKRRKihiensliNE 147 799***********.99999887774443322233443323344********.556778899**************86777777666 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+k+v++ +g ++g+kk++v+y ++r +k+ k++Wvmh+y+l XP_027153820.1 148 QVRWHKTGKTKTVMD-NGIQKGCKKIMVLYrtSKRGSKPDKSKWVMHQYHL 197 999********.99********5545778888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MARSWVIDSR GLATKVKNAA LPTAHQIKDC GANRECPKCH YIIDNSDICH EWPGLPAGVK 60 FDPSDAELLE HLAAKCGVGN SESHKFIDEF IPTLEGDEGI CYTHPENLPG AKKDGSTVHF 120 FYRTTNAYAT GQRKRRKIHI ENSLINEQVR WHKTGKTKTV MDNGIQKGCK KIMVLYRTSK 180 RGSKPDKSKW VMHQYHLGSD EDEKEGQYVV SKIFYQQHKQ VDNNDTSIKI EQSDNHDALL 240 TTEQSDKHNA YDGSPSILDY DIGTSRTSPR TPKIVAPDPP RPGETPSFDD ATDDYSMQPS 300 FQEMGFVKEA LNSSSSDAQV KDKTEHNTWL AGESQAADVN GVDELLLCNE IIDSSILSGD 360 FGLDGGPFGG LTRNTNDVPQ VVGSSACGIA ELENLELDSP PDFQLGDLNF GSQDSVFSWL 420 DKL

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MARSWVIDSR GLATKVKNAA LPTAHQIKDC GANRECPKCH YIIDNSDICH EWPGLPAGVK  60
FDPSDAELLE HLAAKCGVGN SESHKFIDEF IPTLEGDEGI CYTHPENLPG AKKDGSTVHF  120
FYRTTNAYAT GQRKRRKIHI ENSLINEQVR WHKTGKTKTV MDNGIQKGCK KIMVLYRTSK  180
RGSKPDKSKW VMHQYHLGSD EDEKEGQYVV SKIFYQQHKQ VDNNDTSIKI EQSDNHDALL  240
TTEQSDKHNA YDGSPSILDY DIGTSRTSPR TPKIVAPDPP RPGETPSFDD ATDDYSMQPS  300
FQEMGFVKEA LNSSSSDAQV KDKTEHNTWL AGESQAADVN GVDELLLCNE IIDSSILSGD  360
FGLDGGPFGG LTRNTNDVPQ VVGSSACGIA ELENLELDSP PDFQLGDLNF GSQDSVFSWL  420
DKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	1e-97	NAC family protein