PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027153447.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

ARR-B

Protein Properties

Length: 649aa MW: 70469 Da PI: 6.7124

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027153447.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.9	4.6e-28	203	256	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av++L G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl XP_027153447.1 203 KPRVVWSVELHQQFVSAVNHL-GIDKAVPKRILELMNVPGLTRENVASHLQKFRL 256 79*****************.******************************8 PP
2	Myb_DNA-binding	37.8	4.5e-12	205	255	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+ lG + +k+I + m+ g+t++++ s++qk++ XP_027153447.1 205 RVVWSVELHQQFVSAVNHLGIDkaVPKRILELMNvPGLTRENVASHLQKFR 255 678**********************************************97 PP
3	Response_reg	74.4	4.2e-25	21	129	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + +++l+q+l+k y v+++++++ al+ll+e++ +D++l D+ mp+mdG++ll+ e++lp+i++++ + +++ + ++ G XP_027153447.1 21 VLVVDDDIICLRILEQMLRKCMY-MVTTCSQATVALNLLRERKgfFDIVLSDVHMPDMDGFKLLELVGL-EMDLPVIMMSGDDRTSLVMRGIRHG 113 89*******************.*************999****************87754.558****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ eel + XP_027153447.1 114 ACDYLIKPIRTEELKN 129 ***********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 649 aa Download sequence
MASACKEAVP VPEQFPVGLK VLVVDDDIIC LRILEQMLRK CMYMVTTCSQ ATVALNLLRE 60 RKGFFDIVLS DVHMPDMDGF KLLELVGLEM DLPVIMMSGD DRTSLVMRGI RHGACDYLIK 120 PIRTEELKNI WQHVVRKRCN VGKEHEHSGG PEDNDRPKNG IDDAEYTSSF NEGAAENSLK 180 RRKDTKEEDD TEIENDDPTT SKKPRVVWSV ELHQQFVSAV NHLGIDKAVP KRILELMNVP 240 GLTRENVASH LQKFRLYLKR LSGVAQQQAG LPSSFCGALE PNPKVGSLGR FDIQALAASG 300 NIPPQTLAAL HAEFLNRPTG NLVLPGMDQT NLLQASLPVS KCIALDQNVA YGQPLMKCPS 360 NMSKQFSQTV TSADNTHSGP GAWPSKNLVN MGNCDSFAGL TAQNGNVMLS VMQRQQQQHR 420 QQQEQPQKHS TLQEPSRLIN VQPSCLVVPS HSSANFHTGN GLASVNQSCS LSGTSIIDYS 480 ILSPQSNISS LNSGRMGDVE IKPASMLAGL SGAGSISPTL SSGSVNADNG VGIHIQNSAS 540 RFGPARQLSA IVPNMSALQD SYDTSGQMFD HGMLKSTAFV GRGTSIPSRF AVDEAGLPVG 600 NLNQEKMYGE NNANNVKQEP SMNLVENAKV GAPMLRRLSP ADVMSVFSD

Sequence ? help Back to Top

Protein Sequence Length: 649 aa Download sequence

MASACKEAVP VPEQFPVGLK VLVVDDDIIC LRILEQMLRK CMYMVTTCSQ ATVALNLLRE  60
RKGFFDIVLS DVHMPDMDGF KLLELVGLEM DLPVIMMSGD DRTSLVMRGI RHGACDYLIK  120
PIRTEELKNI WQHVVRKRCN VGKEHEHSGG PEDNDRPKNG IDDAEYTSSF NEGAAENSLK  180
RRKDTKEEDD TEIENDDPTT SKKPRVVWSV ELHQQFVSAV NHLGIDKAVP KRILELMNVP  240
GLTRENVASH LQKFRLYLKR LSGVAQQQAG LPSSFCGALE PNPKVGSLGR FDIQALAASG  300
NIPPQTLAAL HAEFLNRPTG NLVLPGMDQT NLLQASLPVS KCIALDQNVA YGQPLMKCPS  360
NMSKQFSQTV TSADNTHSGP GAWPSKNLVN MGNCDSFAGL TAQNGNVMLS VMQRQQQQHR  420
QQQEQPQKHS TLQEPSRLIN VQPSCLVVPS HSSANFHTGN GLASVNQSCS LSGTSIIDYS  480
ILSPQSNISS LNSGRMGDVE IKPASMLAGL SGAGSISPTL SSGSVNADNG VGIHIQNSAS  540
RFGPARQLSA IVPNMSALQD SYDTSGQMFD HGMLKSTAFV GRGTSIPSRF AVDEAGLPVG  600
NLNQEKMYGE NNANNVKQEP SMNLVENAKV GAPMLRRLSP ADVMSVFSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-118	ARR-B family protein