PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027152904.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 273aa    MW: 29072 Da    PI: 4.8919
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027152904.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY919.4e-2973130359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers  dp+ + +tY+ eHnh+
  XP_027152904.1  73 DSWSWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSCLDPTKLLVTYSCEHNHP 130
                     99************************998****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MVQKNPLDHD QQEDSTSTPE NVADDSPFSG DEAYEVTAPS PKKRKGAQKK VITVPIGEGD  60
GSRSKGEVYP PPDSWSWRKY GQKPIKGSPY PRGYYRCSSS KGCPARKQVE RSCLDPTKLL  120
VTYSCEHNHP IPTTTTKHHP TTTSAAAAAP SATATSTSTS TSSTATGNVP VKSAAEDEYG  180
VFANRPGLES DDNSSSSFNE LAGELGWFSN VGSTMMDSPS LVGPAWVDAD VALMLPIGEE  240
DQFLFGDLGE LPECSVVFRR RGLEGTPCCA GSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.21e-59WRKY family protein