PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027152675.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Protein Properties

Length: 445aa MW: 51874.8 Da PI: 9.3808

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027152675.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	39.9	7.5e-13	152	230	14	98
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + + +p f++++g + +k++ l+ ++g sW v+l ++++++l kGW eF++ ++ f+vF++dg+s+f +v +f+ XP_027152675.1 152 RGMKIPTAFMRRYGDN--LKKMVWLKVPTGASWPVEL--LHGDEGTWLHKGWLEFAEYYSIERFHFLVFRYDGSSRF--HVVIFN 230 4699*******977..7789***********..999999*************************99999..998886 PP
2	B3	56.2	6.2e-18	348	443	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 f+ + ps+v++s + +p +f++++ ++++++ l+ ++g ++W+v++ + +s+ + +GWkeFv +n+L +gD++vF+l+ + f + XP_027152675.1 348 FIVFMQPSYVSRSFTVNIPLTFVRDYLTTTHSHMDWELRLSEGkKKWSVRC--TFHSRNAKIYRGWKEFVVENNLVTGDVCVFELVMGaKIF--N 438 677899******************7777889999999877669**..7777777899*******************98543777..6 PP EEEE- CS B3 94 vkvfr 98 v+v+r XP_027152675.1 439 VTVYR 443 66665 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MARWREFAEY YTIDRSYFLV FRYEGNSQFY VIIFDPTASE IEYPVEAGKE QGVHVNDLDQ 60 LPRRRTNPVQ IFDEIESDDD SIEILEEIPA AASSSHAHNR RKSPQVDGNR RSIRAKKERS 120 SGMANTTHSR RRNLVISDAP HFFKVVFFPI NRGMKIPTAF MRRYGDNLKK MVWLKVPTGA 180 SWPVELLHGD EGTWLHKGWL EFAEYYSIER FHFLVFRYDG SSRFHVVIFN TAASEIEYPM 240 ESAHHGMHDR QGQLPRRTSL VRKLEEIYSD DDDDDESIEI VEEISAPCKG KKWGRKSENT 300 HQIGRDDGFV HGLQFGGRIK ARGRSALKKS TSIAYQRAKA FKSKCPFFIV FMQPSYVSRS 360 FTVNIPLTFV RDYLTTTHSH MDWELRLSEG KKKWSVRCTF HSRNAKIYRG WKEFVVENNL 420 VTGDVCVFEL VMGAKIFNVT VYRRC

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MARWREFAEY YTIDRSYFLV FRYEGNSQFY VIIFDPTASE IEYPVEAGKE QGVHVNDLDQ  60
LPRRRTNPVQ IFDEIESDDD SIEILEEIPA AASSSHAHNR RKSPQVDGNR RSIRAKKERS  120
SGMANTTHSR RRNLVISDAP HFFKVVFFPI NRGMKIPTAF MRRYGDNLKK MVWLKVPTGA  180
SWPVELLHGD EGTWLHKGWL EFAEYYSIER FHFLVFRYDG SSRFHVVIFN TAASEIEYPM  240
ESAHHGMHDR QGQLPRRTSL VRKLEEIYSD DDDDDESIEI VEEISAPCKG KKWGRKSENT  300
HQIGRDDGFV HGLQFGGRIK ARGRSALKKS TSIAYQRAKA FKSKCPFFIV FMQPSYVSRS  360
FTVNIPLTFV RDYLTTTHSH MDWELRLSEG KKKWSVRCTF HSRNAKIYRG WKEFVVENNL  420
VTGDVCVFEL VMGAKIFNVT VYRRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	8e-44	B3 family protein