PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027152656.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 541aa MW: 58671.1 Da PI: 5.9352 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96 | 2.6e-30 | 208 | 266 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+ XP_027152656.1 208 SDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCAEDMSILITTYEGTHNHP 266 7***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 541 aa Download sequence |
MAEDKISDDS VSHHAVECSK EAFKDDEFES AKAEMSEVRE ENARLKTLLE KIEKDYKSLQ 60 MRFVDICQPE ANKKSDHDPP PSGNGQIEEL ELVSLCLGRS PSDPKKNNND SSSSFKNRKE 120 DENLKEGLKL GLDFNCFQDC KSDAIDLSTD PSPDNSALES KEEEAAGETW PPSKVLKAMR 180 NEDDDLSQAS IKRARVSVRA RCDTPTMSDG CQWRKYGQKI AKGNPCPRAY YRCTVAPSCP 240 VRKQVQRCAE DMSILITTYE GTHNHPLPVS ATAMASATAA AASMLLSGSS SSEPGLGPAA 300 TTNLRSNLHG LNVNLSDNSK YHPYYLPNSS SSPFPSITLD LTTNPSTSSA QFNMFSSTSL 360 QSRLPSTSLS FSPSQTNVPP ALWSNNNLNY GAISYNKNQM ISTLSSGRTS QEHLYQPFKQ 420 KNYQAPASQQ ALTETLTKAI TSDPSFRSVI AAAITTMVGG GGATPANIKV ENLGKKLKWD 480 EQMTVTSSNG CTSSFLSQSS SSASQSVNLR KQRTQPAFSV SIGAPSATPV DDMDQTNSGE 540 P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 8e-86 | WRKY family protein |