PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027152650.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 433aa    MW: 47600.8 Da    PI: 4.2996
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027152650.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96.1e-1953102255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  XP_027152650.1  53 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 102
                     789******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    
MARKRKAGDC MDNEKNSSSS SSSGDEGNVA WDEMVKEAAA AAAFGGARRA RKRFVGVRQR  60
PSGRWVAEIK DTIQKIRVWL GTFDTAEEAA RAYDEAACLL RGANTRTNFW PCSSSSSATP  120
ALPSKITNLL LSRLKARNNS LAAAAAASGA SSVPASDHEQ QRESHEFPDD QSSDFPDAQF  180
TDFLNDPEDY TPEKDGTTTS TTASNLSTNN SSDSHLSSSS EYCLTQHDHH CEVIREPSLD  240
LECWDDTVQS SNGHECLSWG GSTAEDETEE HAEEGNNVNP GIVDFNFVDE IESCYNCSPF  300
EIAGQISQPV EMEDYGDDPS MLSEAMKRMN YERKFSASLY AFNGITECLK LRLRSVSVLQ  360
QERSEQLTRL RNACNKNIPD QEQQETLQGD NVELIKKQEE EATPADAGAS SSNFDGDLSL  420
WSSIDLPPIC YVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-17ERF family protein