PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027152616.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 394aa MW: 43118.1 Da PI: 6.7035 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.7 | 2.6e-17 | 50 | 99 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +gr++AeIrdp + r +lg+f+taeeAa a++ a+++++g XP_027152616.1 50 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 99 59*******.**********93....35999**********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 394 aa Download sequence |
MEEAMRRLGC LTQAPESDPL LNTSAISKRC TTSTAKRSHK DGASNSGTMR YRGVRRRPWG 60 RYAAEIRDPQ SKERRWLGTF DTAEEAACAY DCAARAMRGV KARTNFVYPT SPSHDTLIPP 120 FHYSKSSSQP AFQSSRSSPH LADHFSGSAN QRNTTSNSVN MLFFRDLFNS SSTNSSILTS 180 SSTLPLYEQG PFADLNFSNS LMGNQSCNNN LTAPKTIDSL STTFSLQRKF DEYQQTVCSG 240 VPTSSTSNNQ VECMDFFPSE PSDSGLLQEI IQGFLPKEKK IVKSEPELAL VDSFAASSSS 300 AVTTDVSMNL SLEGGGLKRR IGDAAYLDCH VPLPQLLDNF SAVVPPQPIP FYSEIYHPAE 360 NVQGSQECML GLGEGFHQYP DLLGAFAAAK MQNA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12980.1 | 1e-14 | ERF family protein |