PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027152588.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 316aa    MW: 35620.5 Da    PI: 8.5743
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027152588.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.8e-20112161255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+ ae+Aa a+++a+++++g
  XP_027152588.1 112 HYRGVRRRP-WGKWAAEIRDPK----KaARVWLGTFDMAEDAALAYDEAALRFKG 161
                     7********.**********94....45***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MKKEREENRG VVAVVSGGEK KIKRRVLDRR HGKRPLSSEA WKKEEKNKGQ DHHHGSLDGG  60
VDLEFENETI TRVASSEYSP DSTRPLLESA VSPATAAAVT SFRQEAQAGR RHYRGVRRRP  120
WGKWAAEIRD PKKAARVWLG TFDMAEDAAL AYDEAALRFK GTKAKLNFPE RVVQGGKYSQ  180
SQLRYPTAVS SSSLSRQQYN PNPQEATETM INPSNTNVPS DTMTMTNYPH LLQYAQLLSS  240
TDAELPYYAS ALYDQQQLLQ PNPQITSPSA HVTPDLHRQP QEDFSSFSSE QCDYQSFCSS  300
DFLKYGKDFD PKSPDQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12334KRRVLDRRHGKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.13e-24ERF family protein