PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027152316.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 303aa    MW: 34526.9 Da    PI: 6.7907
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027152316.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM52.41.7e-1681252122
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkklelee.v.ikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdke 91 
                     ppGf+F Pt+ el+ +yL+ kv+g+k+  e+ v +k v++y++ +P  L +  +++e+ +y F+k +k +++g+r +r+++  s +Wk + k k+
  XP_027152316.1   8 PPGFKFVPTELELL-HYLRSKVNGEKTGYEDeVpLKYVELYDIeDPGVLFE--NTDEDVVYVFTKLRKVAENGSRYERQISgtSCTWKGSDKAKD 99 
                     9*************.**********9554331469999***9967999952..3466788******************65544788********* PP

             NAM  92 vlskkgelvglkktLvfykgrapkgektdWv 122
                     v++ +g+ vg  k + f k++    +k    
  XP_027152316.1 100 VKE-EGNCVGSIKNFSFEKNQ----VKVGYN 125
                     **9.9999*********8544....344444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MKTSQKFPPG FKFVPTELEL LHYLRSKVNG EKTGYEDEVP LKYVELYDIE DPGVLFENTD  60
EDVVYVFTKL RKVAENGSRY ERQISGTSCT WKGSDKAKDV KEEGNCVGSI KNFSFEKNQV  120
KVGYNMKELT LDGRLVHNAE SKDHVVCTIK RKSKNKKKDL QEGTAYLKPP VPDAYDSEYI  180
LPSSKIKLQQ YQQMDKTDSP PVPLLFSSPG YHQNPNPCQE INNQMIADVS LSDQMHGYHY  240
QSNKEVTSIP LMPRSGGNSL GLRIEDPMTD QQWGSRSFGG YNVSMINNQW GLEKLREFVA  300
PNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151159RKSKNKKKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32770.13e-10NAC family protein