PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027151585.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 363aa MW: 39936.3 Da PI: 9.5268 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.4 | 1.1e-31 | 290 | 347 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYegeHnh+ XP_027151585.1 290 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPTMLIVTYEGEHNHS 347 99************************988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence |
MAVELMLGYR NTTDNFVTQL EESGAVQEAA CSGLESVEKL IQLFSRKEQK GTRTISSEQQ 60 NSSMEIEMDC KVETDAAVTK FKKVISLLGR TRTGHARFRR GPVPVATNPV PLKDCSTEEV 120 ADTKVYCPTP IQQIPPPLHD FHLRNRNHHV ISHQSDVNQV TSTFSQTPTG GVVVEKREPI 180 SRSISFSYSP AISHANSFIS SLTGETDSKQ LISSSSAFQL TNLSQVSSAG KPPLSSSSSF 240 KRKCISENGI SGKCSPSAGR CHCSKKRKLR LKRVIRVPAI SMKMADIPPD DYSWRKYGQK 300 PIKGSPHPRG YYKCSSVRGC PARKHVERAL DDPTMLIVTY EGEHNHSLSV AETNTAALIL 360 ESS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24240.1 | 7e-81 | WRKY family protein |