PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027151279.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 193aa    MW: 21960.1 Da    PI: 10.5257
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027151279.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-19113163155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr++  +g+WvAeIrdp     + k+++lg+++tae+Aa a+++a+ +++g
  XP_027151279.1 113 KKFRGVRQRC-WGSWVAEIRDPI----KqKQVWLGTYDTAEKAAIAYDRAAIQFRG 163
                     59*****876.**********72....35***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MSNTEKVKYS ERLTQTTKFI SPSDVNAYPK VVRILVTDPH CTDSSSDEEG STSHCRRVKK  60
HINKIIFKHL LFEENSNNDG IVKEKPSNRN VAGNKRKAKG TEKVKSKDES QRKKFRGVRQ  120
RCWGSWVAEI RDPIKQKQVW LGTYDTAEKA AIAYDRAAIQ FRGPKAITNF LPPLPVKDEL  180
SIITRQALPP NPV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103114KVKSKDESQRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61630.12e-32ERF family protein