PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027151144.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | C2H2 | ||||||||
Protein Properties | Length: 593aa MW: 65486.8 Da PI: 6.0872 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 20.8 | 1e-06 | 140 | 160 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cgk+F+++ L H+rtH XP_027151144.1 140 CKECGKRFPSSRALAGHMRTH 160 ********************9 PP | |||||||
2 | zf-C2H2 | 13.5 | 0.00021 | 168 | 190 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cgk F + + H+++H XP_027151144.1 168 HPCKKCGKAFDSMRAMYGHMKSH 190 78*******************99 PP | |||||||
3 | zf-C2H2 | 12 | 0.00066 | 515 | 537 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k+Fs+ L H r H XP_027151144.1 515 HECPICFKVFSTGQALGGHKRAH 537 79*************99999988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 593 aa Download sequence |
MEEVQEQKFV CKFCNKCCFS GKSLGGHMRR HLALIAAAKK EKVKADINVG FGGGYDHDDH 60 HDHGDFGLEE NATNSCRFSA EQSSSSLIPE KVDNHSSSMN LENDDHDQDQ DNYGLRENPK 120 KSWKISDLRA CGSPRKGNIC KECGKRFPSS RALAGHMRTH SGKFKGRHPC KKCGKAFDSM 180 RAMYGHMKSH PKRSRVSSES ADGISDFDIV YPRKKRSVMR YKSTHSFSYS TANASSSLNE 240 NDEVEDAAIC LIMLSRGVSN WDGVDCPLVY TDNATSAYFE AKSVSLPEES TKVDAEDVVG 300 NPDEVEMPEK PIEELYSCFF GSANSLSNQN VSQFNELSSE FASGNEKKAE LEFRVYEPLC 360 RGEPNESRLL DVSGVELDGS DSAGVVEPLK DQSKAVGMDQ EDIQLMDPNP CKKVEFNAHA 420 PELEICSSDR ADTADEIFKI SEKKREYRCR ACNMSFSSHR ALGGHSNKHK INGHCSASGT 480 ESSHLTDIEC NGTSAEAGSD GVAMADLQLT KTKDHECPIC FKVFSTGQAL GGHKRAHYAG 540 FSESRIKEMT AANQELRDIQ NVFDLNLPVI THPGARDDGI SLKAWYEPLV ISN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45120.1 | 3e-19 | C2H2 family protein |