PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027151144.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 593aa    MW: 65486.8 Da    PI: 6.0872
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027151144.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H220.81e-06140160323
                     ETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                     C+ Cgk+F+++  L  H+rtH
  XP_027151144.1 140 CKECGKRFPSSRALAGHMRTH 160
                     ********************9 PP

2zf-C2H213.50.00021168190123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cgk F +   +  H+++H
  XP_027151144.1 168 HPCKKCGKAFDSMRAMYGHMKSH 190
                     78*******************99 PP

3zf-C2H2120.00066515537123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++Cp+C k+Fs+   L  H r H
  XP_027151144.1 515 HECPICFKVFSTGQALGGHKRAH 537
                     79*************99999988 PP

Sequence ? help Back to Top
Protein Sequence    Length: 593 aa     Download sequence    
MEEVQEQKFV CKFCNKCCFS GKSLGGHMRR HLALIAAAKK EKVKADINVG FGGGYDHDDH  60
HDHGDFGLEE NATNSCRFSA EQSSSSLIPE KVDNHSSSMN LENDDHDQDQ DNYGLRENPK  120
KSWKISDLRA CGSPRKGNIC KECGKRFPSS RALAGHMRTH SGKFKGRHPC KKCGKAFDSM  180
RAMYGHMKSH PKRSRVSSES ADGISDFDIV YPRKKRSVMR YKSTHSFSYS TANASSSLNE  240
NDEVEDAAIC LIMLSRGVSN WDGVDCPLVY TDNATSAYFE AKSVSLPEES TKVDAEDVVG  300
NPDEVEMPEK PIEELYSCFF GSANSLSNQN VSQFNELSSE FASGNEKKAE LEFRVYEPLC  360
RGEPNESRLL DVSGVELDGS DSAGVVEPLK DQSKAVGMDQ EDIQLMDPNP CKKVEFNAHA  420
PELEICSSDR ADTADEIFKI SEKKREYRCR ACNMSFSSHR ALGGHSNKHK INGHCSASGT  480
ESSHLTDIEC NGTSAEAGSD GVAMADLQLT KTKDHECPIC FKVFSTGQAL GGHKRAHYAG  540
FSESRIKEMT AANQELRDIQ NVFDLNLPVI THPGARDDGI SLKAWYEPLV ISN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45120.13e-19C2H2 family protein